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- Heeft publiccode.yml:
- Organisatie:
129 repositories gevonden
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SCONE
SCONE -
A-Model-of-Individual-BMI-Trajectories
Supplementary Information for the article "A Model of Individual BMI Trajectories" by Laurens Bogaardt, Anoukh van Giessen, H. Susan J. Picavet, Hendriek C. Boshuizen published on 26 February 2024 in Mathematical Medicine and Biology.
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SimpleBox
SimpleBox (4nano)
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cm-evaluation
Effectiveness of a COVID-19 contact tracing app in a simulation model with indirect and informal contact tracing
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auriclass
Quick estimation of Candida auris clade using mash
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SARS-CoV-2_wastewater_and_hospital_admissions
Scripts used for the paper Inferring Hospital Admissions from SARS-CoV-2 Virus Loads in Wastewater in the Netherlands, August 2020 – February 2022
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SARS-CoV-2_sewage
SARS-CoV-2_sewage
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fadingmpoxoutbreak
fadingmpoxoutbreak -
juno-assembly-verification
Juno-assembly verification -
DASH
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juno-annotation
Annotation of chromosomes and plasmids of bacteria (AMR group)
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juno-population
Juno-Population -
clcbioformatter
Re-formatting Fasta headers to fit CLC bio. Requested by the AMR group.
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containers
Creating and uploading containers to ghcr
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ATdatabase
AT-DATABASE -
samanapir
Package for Samen Analyseren Tool
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juno-blast
Automated BLASTing from fasta files.
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ids_bacteriology_man
Code for the website used for documenting bacteriology pipelines (tailor made for RIVM people). Written in R (bookdown)
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refsampr
Internal R package (for RIVM) for making quality control reports of reference samples. Different assembly metrics are followed up and plotted over time.